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Genomic data from the Emperor penguin (Aptenodytes forsteri).

Dataset type: Genomic
Data released on July 06, 2011

Zhang G; Lambert DM; Wang J (2011): Genomic data from the Emperor penguin (Aptenodytes forsteri). GigaScience. https://doi.org/10.5524/100005

DOI10.5524/100005

The Emperor penguin (Aptenodytes forsteri) is a large penguin, standing over 1 meter tall, with distinctive black, yellow and white markings. Like most penguins, the emperor penguins are indigenous to Antarctica and exist between the 66th and 78th parallels. Famous for its unique social and reproductive behavior, the emperor penguin also possesses a number of other notable evolutionary qualities: its stature, its feathers, its incubation process, and its swimming capabilities. The Aptenodytes forsteri genome offers new insights into this remarkable bird.

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Additional details

Read the peer-reviewed publication(s):

  • Zhang, G., Li, B., Li, C., Gilbert, M. T. P., Jarvis, E. D., & Wang, J. (2014). Comparative genomic data of the Avian Phylogenomics Project. GigaScience, 3(1). https://doi.org/10.1186/2047-217x-3-26
  • Li, C., Zhang, Y., Li, J., Kong, L., Hu, H., Pan, H., Xu, L., Deng, Y., Li, Q., Jin, L., Yu, H., Chen, Y., Liu, B., Yang, L., Liu, S., Zhang, Y., Lang, Y., Xia, J., He, W., … Zhang, G. (2014). Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment. GigaScience, 3(1). https://doi.org/10.1186/2047-217x-3-27
  • Zhang, G., Li, C., Li, Q., Li, B., Larkin, D. M., Lee, C., Storz, J. F., Antunes, A., Greenwold, M. J., Meredith, R. W., Ödeen, A., Cui, J., Zhou, Q., Xu, L., Pan, H., Wang, Z., Jin, L., Zhang, P., … Hu, H. (2014). Comparative genomics reveals insights into avian genome evolution and adaptation. Science, 346(6215), 1311–1320. https://doi.org/10.1126/science.1251385
  • Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., Ho, S. Y. W., Faircloth, B. C., Nabholz, B., Howard, J. T., Suh, A., Weber, C. C., da Fonseca, R. R., Li, J., Zhang, F., Li, H., Zhou, L., Narula, N., Liu, L., … Zhang, G. (2014). Whole-genome analyses resolve early branches in the tree of life of modern birds. Science, 346(6215), 1320–1331. https://doi.org/10.1126/science.1253451
Related datasets:

doi:10.5524/100005 IsCitedBy doi:10.5524/100649

Projects:

Go to Genome 10K website
Go to The Avian Phylogenomic Project website

Click on a table column to sort the results.

Table Settings
Sample ID Common Name Scientific Name Sample Attributes Taxonomic ID Genbank Name
Aptenodytes_forsteri Emperor penguin Aptenodytes forsteri 9233 emperor penguin

Click on a table column to sort the results.

Table Settings

File Name Description Sample ID Data Type File Format Size Release Date File Attributes Download
Readme TEXT 140 B 2011-07-06 MD5 checksum: 75725b399bc407da5945c5f92a6b38ba
Sequence assembly FASTA 369.59 MB 2011-07-06 MD5 checksum: 8bcb40e3d2f90188e56b531507a15b79
coding sequence predictions on assembly Coding sequence FASTA 7.11 MB 2014-07-09
assembled scaffolds from sequence data Sequence assembly FASTA 369.51 MB 2014-07-09
coding sequence annotations of assembly Annotation GFF 1.76 MB 2014-07-09 MD5 checksum: a28665dd70568bfd7853e3c663fcff8c
peptide translations of CDS predictions Protein sequence FASTA 4.61 MB 2014-07-09 MD5 checksum: 26bc74a0fd5804e9ff35c8d00e90db7f
repeat masker results Repeat sequence UNKNOWN 8.11 MB 2014-07-09 MD5 checksum: ad1eed899c479ad68b005feedc3add2e
Date Action
September 2, 2019 Relationship added : DOI 100649