Genomic data from the Emperor penguin (Aptenodytes forsteri).
Dataset type: Genomic
Data released on July 06, 2011
Zhang G; Lambert DM; Wang J (2011): Genomic data from the Emperor penguin (Aptenodytes forsteri). GigaScience. https://doi.org/10.5524/100005
The Emperor penguin (Aptenodytes forsteri) is a large penguin, standing over 1 meter tall, with distinctive black, yellow and white markings. Like most penguins, the emperor penguins are indigenous to Antarctica and exist between the 66th and 78th parallels. Famous for its unique social and reproductive behavior, the emperor penguin also possesses a number of other notable evolutionary qualities: its stature, its feathers, its incubation process, and its swimming capabilities. The Aptenodytes forsteri genome offers new insights into this remarkable bird.
Additional details
Read the peer-reviewed publication(s):
- Zhang, G., Li, B., Li, C., Gilbert, M. T. P., Jarvis, E. D., & Wang, J. (2014). Comparative genomic data of the Avian Phylogenomics Project. GigaScience, 3(1). https://doi.org/10.1186/2047-217x-3-26
- Li, C., Zhang, Y., Li, J., Kong, L., Hu, H., Pan, H., Xu, L., Deng, Y., Li, Q., Jin, L., Yu, H., Chen, Y., Liu, B., Yang, L., Liu, S., Zhang, Y., Lang, Y., Xia, J., He, W., … Zhang, G. (2014). Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment. GigaScience, 3(1). https://doi.org/10.1186/2047-217x-3-27
- Zhang, G., Li, C., Li, Q., Li, B., Larkin, D. M., Lee, C., Storz, J. F., Antunes, A., Greenwold, M. J., Meredith, R. W., Ödeen, A., Cui, J., Zhou, Q., Xu, L., Pan, H., Wang, Z., Jin, L., Zhang, P., … Hu, H. (2014). Comparative genomics reveals insights into avian genome evolution and adaptation. Science, 346(6215), 1311–1320. https://doi.org/10.1126/science.1251385
- Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., Ho, S. Y. W., Faircloth, B. C., Nabholz, B., Howard, J. T., Suh, A., Weber, C. C., da Fonseca, R. R., Li, J., Zhang, F., Li, H., Zhou, L., Narula, N., Liu, L., … Zhang, G. (2014). Whole-genome analyses resolve early branches in the tree of life of modern birds. Science, 346(6215), 1320–1331. https://doi.org/10.1126/science.1253451
Related datasets:
doi:10.5524/100005 IsCitedBy doi:10.5524/100649
Projects:
Click on a table column to sort the results.
Table SettingsSample ID | Common Name | Scientific Name | Sample Attributes | Taxonomic ID | Genbank Name |
---|---|---|---|---|---|
Aptenodytes_forsteri | Emperor penguin | Aptenodytes forsteri | 9233 | emperor penguin |
Click on a table column to sort the results.
Table SettingsFile Name | Description | Sample ID | Data Type | File Format | Size | Release Date | File Attributes | Download |
---|---|---|---|---|---|---|---|---|
Readme | TEXT | 140 B | 2011-07-06 | MD5 checksum: 75725b399bc407da5945c5f92a6b38ba |
||||
Sequence assembly | FASTA | 369.59 MB | 2011-07-06 | MD5 checksum: 8bcb40e3d2f90188e56b531507a15b79 |
||||
coding sequence predictions on assembly | Coding sequence | FASTA | 7.11 MB | 2014-07-09 | ||||
assembled scaffolds from sequence data | Sequence assembly | FASTA | 369.51 MB | 2014-07-09 | ||||
coding sequence annotations of assembly | Annotation | GFF | 1.76 MB | 2014-07-09 | MD5 checksum: a28665dd70568bfd7853e3c663fcff8c |
|||
peptide translations of CDS predictions | Protein sequence | FASTA | 4.61 MB | 2014-07-09 | MD5 checksum: 26bc74a0fd5804e9ff35c8d00e90db7f |
|||
repeat masker results | Repeat sequence | UNKNOWN | 8.11 MB | 2014-07-09 | MD5 checksum: ad1eed899c479ad68b005feedc3add2e |
Date | Action |
---|---|
September 2, 2019 | Relationship added : DOI 100649 |