TY - DATA T1 - Supporting data for "16GT: a fast and sensitive variant caller using a 16-genotype probabilistic model" AU - Luo, Ruibang AU - Schatz, Michael C AU - Salzberg, Steven L DO - 10.5524/100316 UR - http://gigadb.org/dataset/100316 AB - 16GT is a variant caller for Illumina whole-genome and whole-exome sequencing data. It uses a new 16-genotype probabilistic model to unify SNP and indel calling in a single variant calling algorithm. In benchmark comparisons with five other widely used variant callers on a modern 36-core server, 16GT demonstrated improved sensitivity in calling SNPs, and it provided comparable sensitivity and accuracy for calling indels as compared to the GATK HaplotypeCaller. 16GT is available at https://github.com/aquaskyline/16GT. KW - Software KW - Variant calling KW - Bayesian model KW - SNP calling KW - Indel calling PY - 2017 PB - GigaScience Database LA - en ER -